Mourdas
Mohamed
  • Occitanie Regional delegation, Montpellier, France

Function

Engineer

Team(s)

Membership Institute

IRD

I develop bioinformatics methods and tools for the management, indexing, and efficient access of large-scale genomic data. I also work on the analysis and interactive visualization of pangenomes and variation graphs, with applications to the study of genomic diversity and transposable elements.

Keywords
  • Bioinformatics
  • Pangenomique
  • Retrotransposons

Publications

Mohamed M., Sabot F., Varoqui M., Mugat B., Audouin K., Pelisson A., Fiston-Lavier A.-S., Chambeyron S. 2023. TrEMOLO: accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches. Genome Biology. 24. 63.
Mohamed M., Dang T. M. N., Ogyama Y., Burlet N., Mugat B., Boulesteix M., Merel V., Veber P., Salces-Ortiz J., Severac D., Pelisson A., Vieira C., Sabot F., Fablet M., Chambeyron S. 2020. A transposon story: from TE content to TE dynamic invasion of Drosophila genomes using the single-molecule sequencing technology from Oxford Nanopore. Cells. 9(8). 1776.
Toutes les publications
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