Kořinková N., Techer A., Majeská Čudejková M., Nguyen D.T., Kopečný D., Contreras-Moreira B., Navrátilová P., Gantet P., Bergougnoux V. 2025. Temporal regulation of gene expression during auxin-triggered crown root formation in barley: an integrated approach . Plant and Cell Physiology. 66. 1284–1303.

Nakombo-Gbassault P., Arenas S., Affortit P., Faye A., Flis P., Sine B., Moukouanga D., Gantet P., Komba E. K., Kane N., Bennett M., Wells D., Cubry P., Bailey E., Grondin A., Vigouroux Y., Laplaze L. 2025. Genetic control of the leaf ionome in pearl millet and correlation with root and agromorphological traits. PLOS ONE. 20(5). e0319140.

Nguyen T. D., Gonin M., Motyka M., Champion A., Hensel G., Gantet P., Bergougnoux V. 2025. Two Lateral Organ Boundary Domain Transcription Factors HvCRL1 and HvCRL1L1 Regulate Shoot-Borne Root Formation in Barley (Hordeum vulgare L.). Journal of Plant Growth Regulation. 44. 3988–4000.

Beckers A., Mamiya A., Furutani M., Bennett M. J., Fukaki H., Sawa S., Gantet P., Laplaze L., Guyomarc’h S. 2025. Multiple layers of regulators emerge in the network controlling lateral root organogenesis. Trends in Plant Science. 30 (5). 499-514.

Tran H.L., Hoang T.G., Phung N.T.P., Le H.H., Grondin A., Gantet P 2024. Quantitative trait loci for grain mineral element accumulation in Vietnamese rice landraces. PLOS One. 19. e0315666.

De la Fuente C., Grondin A., Sine B., Debieu M., Belin C., Hajjarpoor A., Atkinson J., Passot S., Salson M., Orjuela J., Tranchant-Dubreuil C., Brossier J.-R., Steffen M., Morgado C., Dinh H. N., Pandey B., Darmau J., Champion A., Petitot A.-S., Barrachina C., Pratlong M., Mounier T., Gantet P., Gangashetty P., Guedon Y., Vadez V., Reichheld J.-P., Bennett M., Kane N., Guyomarc'h S., Wells D., Vigouroux Y., Laplaze L. 2024. Glutaredoxin regulation of primary root growth confers early drought stress tolerance in pearl millet. eLife. 12.

Nguyen D.T., Zavadil Kokáš F., Gonin M., Lavarenne J., Collin M., Gantet P., Bergougnoux V. 2024. Transcriptional changes during crown-root development and emergence in barley (Hordeum vulgare L.). BMC Plant Biology. 24. 438.

Ndoye M. S., Lucas M., Ajmera I. B., Sine B., Faye A., Burridge J., Ngom M., Gantet P., Wells D. M., Kane N. A., Lynch J. P., Diédhiou A. G., Grondin A., Laplaze L. 2024. Modeling reveals synergies among root traits for phosphorus acquisition in pearl millet. Crop Design. 3 (3). 100059.

Pélissier P.-M., Parizot B., Jia L., De Knijf A., Goossens V., Gantet P., Champion A., Audenaert D., Xuan W., Beeckman T., Motte H. 2024. Nitrate and Ammonium, the Yin and Yang of Nitrogen Uptake: A Time-Course Transcriptomic Study in Rice. Frontiers in Plant Science. 15. 1343073.

Ndella Thiaw M. R., Gantet P. 2023. The emerging functions of mini zinc finger (MIF) microproteins in seed plants: A minireview. Biochimie. 218. 69-75.

Nguyen H. T., Cheaib M., Fournel M., Rios M., Gantet P., Laplaze L., Guyomarc'h S., Riemann M., Heitz T., Petitot A.-S., Champion A. 2023. Genetic analysis of the rice jasmonate receptors reveals specialized functions for OsCOI2. PLoS ONE. 18 (9). e0291385.

Khodaeiaminjan M., Knoch D., Ndella Thiaw M. R., Marchetti C. F., Kořínková N., Techer A., Nguyen T. D., Chu J., Bertholomey V., Doridant I., Gantet P., Graner A., Neumann K., Bergougnoux V. 2023. Genome-wide association study in two-row spring barley landraces identifies QTL associated with plantlets root system architecture traits in well-watered and osmotic stress conditions. Frontiers in Plant Science. 14. 1120.

De la Fuente Canto C., Diouf M. N., Ndour P. M. S., Debieu M., Grondin A., Passot S., Champion A., Barrachina C., Pratlong M., Gantet P., Assigbetse K., Kane N. A., Cubry P., Diedhiou A., Heulin T., Achouak W., Vigouroux Y., Cournac L., Laplaze L. 2022. Genetic control of rhizosheath formation in pearl millet. Scientific Reports. 12. 9205.

Affortit P., Effa-Effa B., Ndoye M. S., Moukouanga D., Luchaire N., Cabrera-Bosquet L., Peralvarez M., Pilloni R., Welcker C., Champion A., Gantet P., Diedhiou A. G., Manneh B., Aroca R., Vadez V., Laplaze L., Cubry P., Grondin A. 2022. Physiological and genetic control of transpiration efficiency in African rice, Oryza glaberrima Steud. Journal of Experimental Botany. 73(15). 5279-5293.

Gonin M., Jeong K., Coudert Y., Lavarenne J., Hoang G., Bes M., To H., Thiaw M.-R., Do T., Moujouanga D., Guyomarc'h S., Bellande K., Brossier J., Parizot B., Nguyen H., Beeckman T., Bergougnoux V., Rouster J., Sallaud C., Laplaze L., Champion A., Gantet P. 2022. CROWN ROOTLESS1 binds DNA with a relaxed specificity and activates OsROP and OsbHLH044 genes involved in crown root formation in rice. The Plant Journal. 111(2). 546-566.

Bellande K., Trinh D.-C., Gonzalez A.-A., Dubois E., Petitot A.-S., Lucas M., Champion A., Gantet P., Laplaze L., Guyomarc'h S. 2022. PUCHI represses early meristem formation in developing lateral roots of Arabidopsis thaliana. Journal of Experimental Botany. 73 (11). 3496-3510.

Saini S., Kaur N., Marothia D., Singh B., Singh V., Gantet P., Pati P. K. 2021. Morphological analysis, protein profiling and expression analysis of auxin homeostasis genes of roots of two contrasting cultivars of rice provide inputs on mechanisms involved in rice adaptation towards salinity stress. Plants. 10(8). 1544.

Le T., Gathignol F., Vu H., Nguyen K., Tran L., Vu H., Dinh T., Lazennec F., Pham X., Very A.-A., Gantet P., Hoang G. 2021. Genome-Wide Association Mapping of Salinity Tolerance at the Seedling Stage in a Panel of Vietnamese Landraces Reveals New Valuable QTLs for Salinity Stress Tolerance Breeding in Rice. Plants. 10 (6). 1088.

Lacombe S., Bangratz M., Ta H., Nguyen T., Gantet P., Brugidou C. 2021. Optimized RNA-Silencing Strategies for Rice Ragged Stunt Virus Resistance in Rice. Plants. 10 (10). 2008.

Grondin A., Affortit P., Tranchant-Dubreuil C., De la Fuente-Canto C., Mariac C., Gantet P., Vadez V., Vigouroux Y., Laplaze L. 2020. Aquaporins are main contributors to root hydraulic conductivity in pearl millet [Pennisetum glaucum (L) R. Br.]. PLOS ONE. 15(10). e0233481.

Lavarenne J., Gonin M., Champion A., Javelle M., Adam H., Rouster J., Conejero G., Lartaud M., Verdeil J.-L., Laplaze L., Sallaud C., Lucas M., Gantet P. 2020. Transcriptome profiling of laser-captured crown root primordia reveals new pathways activated during early stages of crown root formation in rice. PLOS ONE. 15(11). e0238736.

Montiel G., Gaudet M., Laurans F., Rozenberg P., Simon M., Gantet P., Jay-Allemand C., Breton C. 2020. Overexpression of MADS-box Gene AGAMOUS-LIKE 12 Activates Root Development in Juglans sp. and Arabidopsis thaliana. Plants. 9 (4). 444.

Giang T. H., Lam V. D., Thom T. N., Nhung K. T., Gathignol F., Chung D. M., Jouannic S., Khanh D. T., Trung H. K., Vinh N. D., Lebrun M., Courtois B., Gantet P. 2019. Genome-wide Association Study of a panel of Vietnamese Rice Landraces Reveals New QTLs for tolerance to water deficit during the vegetative phase. Rice. 12. 4.

Gonin M., Bergougnoux V., Nguyen T. D., Gantet P., Champion A. 2019. What Makes Adventitious Roots?. Plants. 8(7). 240.

Lavarenne J., Gonin M., Guyomarc'h S., Rouster J., Champion A., Sallaud C., Laplaze L., Gantet P., Lucas M. 2019. Inference of the gene regulatory network acting downstream of CROWN ROOTLESS 1 in rice reveals a regulatory cascade linking genes involved in auxin signaling, crown root initiation, and root meristem specification and maintenance. The Plant Journal. 100(5). 954-968.

To H. T. M., Nguyen H. T., Dang N. T. M., Nguyen N. H., Bui T. X., Lavarenne J., Phung N. T. P., Gantet P., Lebrun M., Bellafiore S., Champion A. 2019. Unraveling the genetic elements involved in shoot and root growth regulation by jasmonate in rice using a genome-wide association study. Rice. 12. 69.

Nguyen K. L., Grondin A., Courtois B., Gantet P. 2019. Next-Generation Sequencing Accelerates Crop Gene Discovery. Trends in Plant Science. 24 (3). 263-274.

Hoang G. T., Gantet P., Nguyen K. H., Phung N. T. P., Ha L. T., Nguyen T. T., Lebrun M., Courtois B., Pham X. H. 2019. Genome-wide association mapping of leaf mass traits in a Vietnamese rice landrace panel. PLOS ONE. 14 (7). e0219274.

Faye A., Sine B., Chopart J.-L., Grondin A., Lucas M., Diedhiou A. G., Gantet P., Cournac L., Ming D., Audebert A., Kane A., Laplaze L. 2019. Development of a model estimating root length density from root impacts on a soil profile in pearl millet (Pennisetum glaucum (L.) R. Br). Application to measure root system response to water stress in field conditions. PLOS ONE. 14 (7). e0214182.

Trinh D.-C., Lavenus J., Goh T., Boutte Y., Drogue Q., Vaissayre V., Tellier F., Lucas M., Voss U., Gantet P., Faure J.-D., Dussert S., Fukaki H., Bennett M., Laplaze L., Guyomarch' S. 2019. PUCHI regulates very long chain fatty acid biosynthesis during lateral root and callus formation. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 116 (28). 14325-14330.