Leclerc L., Agoutin G., Brévault T., Champion A., Mainguy J., Nègre N., Yainna S., Pascal G., Gaudriault S., Ogier JC. 2025. Nested PCR to optimize rpoB metabarcoding for low-concentration and host-associated bacterial DNA. Microbiology Spectrum. 13.

Ndecky S., Malherbe L., Villette C., Chalvon V., Meusnier I., Beltran-Valencia D., Baumberger N., Riemann M., Kroj T., Champion A., Heitz T. 2025. Rice JASMONIC ACID OXIDASES control resting jasmonate metabolism to promote growth and repress basal immune responses. Plant Physiology. 198.

Nguyen T. D., Gonin M., Motyka M., Champion A., Hensel G., Gantet P., Bergougnoux V. 2025. Two Lateral Organ Boundary Domain Transcription Factors HvCRL1 and HvCRL1L1 Regulate Shoot-Borne Root Formation in Barley (Hordeum vulgare L.). Journal of Plant Growth Regulation. 44. 3988–4000.

Cheaib M., Nguyen HT., Couderc M., Serret J, Soriano A., Larmande P., Richter C., Junker BH., Raorane ML., Petitot AS., Champion A. 2024. Transcriptomic and metabolomic reveal OsCOI2 as the jasmonate-receptor master switch in rice root. PLoS ONE. 19.

Leclerc L., Nguyen T. H., Duval P., Mariotti V., Petitot A.-S., Orjuela J., Ogier J.-C., Gaudriault S., Champion A., Negre N. 2024. Early transcriptomic responses of rice leaves to herbivory by Spodoptera frugiperda. Scientific Reports. 14. 2836.

De la Fuente C., Grondin A., Sine B., Debieu M., Belin C., Hajjarpoor A., Atkinson J., Passot S., Salson M., Orjuela J., Tranchant-Dubreuil C., Brossier J.-R., Steffen M., Morgado C., Dinh H. N., Pandey B., Darmau J., Champion A., Petitot A.-S., Barrachina C., Pratlong M., Mounier T., Gantet P., Gangashetty P., Guedon Y., Vadez V., Reichheld J.-P., Bennett M., Kane N., Guyomarc'h S., Wells D., Vigouroux Y., Laplaze L. 2024. Glutaredoxin regulation of primary root growth confers early drought stress tolerance in pearl millet. eLife. 12.

Pélissier P.-M., Parizot B., Jia L., De Knijf A., Goossens V., Gantet P., Champion A., Audenaert D., Xuan W., Beeckman T., Motte H. 2024. Nitrate and Ammonium, the Yin and Yang of Nitrogen Uptake: A Time-Course Transcriptomic Study in Rice. Frontiers in Plant Science. 15. 1343073.

Bonnamy M., Pinel-Galzi A., Gorgues L., Chalvon V., Hebrard E., Cheron S., Nguyen T. H., Poulicard N., Sabot F., Pidon H., Champion A., Cesari S., Kroj T., Albar L. 2023. Rapid evolution of an RNA virus to escape recognition by a rice nucleotide-binding and leucine-rich repeat domain immune receptor. New Phytologist. 237(3). 900-913.

Nguyen H. T., Cheaib M., Fournel M., Rios M., Gantet P., Laplaze L., Guyomarc'h S., Riemann M., Heitz T., Petitot A.-S., Champion A. 2023. Genetic analysis of the rice jasmonate receptors reveals specialized functions for OsCOI2. PLoS ONE. 18 (9). e0291385.

Ndecky S., Eiche E., Cognat V., Pflieger D., Pawar N., Betting F., Saha S., Champion A., Riemann M., Heitz T., Nguyen T. H. 2023. Jasmonate signaling controls negative and positive effectors of salt stress tolerance in rice. Journal of Experimental Botany. 74 (10). 3220-3239.

Affortit P., Effa-Effa B., Ndoye M. S., Moukouanga D., Luchaire N., Cabrera-Bosquet L., Peralvarez M., Pilloni R., Welcker C., Champion A., Gantet P., Diedhiou A. G., Manneh B., Aroca R., Vadez V., Laplaze L., Cubry P., Grondin A. 2022. Physiological and genetic control of transpiration efficiency in African rice, Oryza glaberrima Steud. Journal of Experimental Botany. 73(15). 5279-5293.

De la Fuente Canto C., Diouf M. N., Ndour P. M. S., Debieu M., Grondin A., Passot S., Champion A., Barrachina C., Pratlong M., Gantet P., Assigbetse K., Kane N. A., Cubry P., Diedhiou A., Heulin T., Achouak W., Vigouroux Y., Cournac L., Laplaze L. 2022. Genetic control of rhizosheath formation in pearl millet. Scientific Reports. 12. 9205.

Gonin M., Jeong K., Coudert Y., Lavarenne J., Hoang G., Bes M., To H., Thiaw M.-R., Do T., Moujouanga D., Guyomarc'h S., Bellande K., Brossier J., Parizot B., Nguyen H., Beeckman T., Bergougnoux V., Rouster J., Sallaud C., Laplaze L., Champion A., Gantet P. 2022. CROWN ROOTLESS1 binds DNA with a relaxed specificity and activates OsROP and OsbHLH044 genes involved in crown root formation in rice. The Plant Journal. 111(2). 546-566.

Bellande K., Trinh D.-C., Gonzalez A.-A., Dubois E., Petitot A.-S., Lucas M., Champion A., Gantet P., Laplaze L., Guyomarc'h S. 2022. PUCHI represses early meristem formation in developing lateral roots of Arabidopsis thaliana. Journal of Experimental Botany. 73 (11). 3496-3510.

Lavarenne J., Gonin M., Champion A., Javelle M., Adam H., Rouster J., Conejero G., Lartaud M., Verdeil J.-L., Laplaze L., Sallaud C., Lucas M., Gantet P. 2020. Transcriptome profiling of laser-captured crown root primordia reveals new pathways activated during early stages of crown root formation in rice. PLOS ONE. 15(11). e0238736.

Djighaly P. I., Ngom D., Diagne N., Fall D., Ngom M., Diouf D., Hocher V., Laplaze L., Champion A., Farrant J. M., Svistoonoff S. 2020. Effect of Casuarina plantations inoculated with arbuscular mycorrhizal fungi and Frankia on the diversity of herbaceous vegetation in saline environments in Senegal. Diversity. 12 (8). 293.

Ngom M., Cissoko M., Gray K., Hocher V., Laplaze L., Sy M.O., Svistoonoff S., Champion A. 2019. Establishment of actinorhizal symbiosis in response to Ethylene, Salicylic Acid and Jasmonate. Methods in Molecular Biology. 2085. 117-130.

Nguyen T.H., Mai H.T.T., Moukouanga D., Lebrun M., Bellafiore S., Champion A. 2019. A CRISPR/Cas9-mediated gene editing of the Jasmonate biosynthesis OsAOC gene in rice. Methods in Molecular Biology. 2085. 199-209.

Larrieu A., Nguyen T.H., Champion A. 2019. Use of fluorescent reporters to analyse dynamic and spatial responses to mechanical wounding. Methods in Molecular Biology. 2085. 161-168.

Lavarenne J., Gonin M., Guyomarc'h S., Rouster J., Champion A., Sallaud C., Laplaze L., Gantet P., Lucas M. 2019. Inference of the gene regulatory network acting downstream of CROWN ROOTLESS 1 in rice reveals a regulatory cascade linking genes involved in auxin signaling, crown root initiation, and root meristem specification and maintenance. The Plant Journal. 100(5). 954-968.

Gonin M., Bergougnoux V., Nguyen T. D., Gantet P., Champion A. 2019. What Makes Adventitious Roots?. Plants. 8(7). 240.

To H. T. M., Nguyen H. T., Dang N. T. M., Nguyen N. H., Bui T. X., Lavarenne J., Phung N. T. P., Gantet P., Lebrun M., Bellafiore S., Champion A. 2019. Unraveling the genetic elements involved in shoot and root growth regulation by jasmonate in rice using a genome-wide association study. Rice. 12. 69.

Nguyen H. T., Thi Mai To H., Lebrun M., Bellafiore S., Champion A. 2019. Jasmonates—the master regulator of rice development, adaptation and defense. Plants. 8 (9). 339.