Berube B., Ernst E., Cahn J., Roche B., De Santis Alves C., Lynn J., Scheben A., Grimanelli D., Siepel A., Ross-Ibarra J., Kermicle J., Martienssen R. A. 2024. Teosinte Pollen Drive guides maize diversification and domestication by RNAi. Nature. 633. 380-388.
Shimada A., Cahn J., Ernst E., Lynn J., Grimanelli D., Henderson I., Kakutani T., Martienssen R. A. 2024. Retrotransposon addiction promotes centromere function via epigenetically activated small RNAs. Nature Plants. 10. 1304-1316.
Vega J. M., Podio M., Orjuela J., Siena L., Pessino S., Combes M. C., Mariac C., Albertini E., Pupilli F., Ortiz J. P. A., Leblanc O. 2024. Chromosome-scale genome assembly and annotation of Paspalum notatum Flüggé var. saurae. Scientific Data. 11. 891.
Myers Z., Wootan C., Liang Z., Zhou P., Engelhorn J., Hartwig T., Springer N. 2023. Conserved and variable heat stress responses of the Heat Shock Factor transcription factor family in maize and Setaria viridis. Plant Direct. 7(4). e489.
Hartwig T., Banf M., Passaia Prietsch G., Zhu J.-Y., Mora-Ramírez I., Schippers J., Snodgrass S., Seetharam A., Huettel B., Kolkman J., Yang J., Engelhorn J., Wang Z.-Y. 2023. Hybrid allele-specific ChIP-seq analysis identifies variation in brassinosteroid-responsive transcription factor binding linked to traits in maize. Genome Biology. 24(1). 108.
Manosalva Pérez N., Ferrari C., Engelhorn J., Depuydt T., Nelissen H., Hartwig T., Vandepoele K. 2023. MINI-AC: inference of plant gene regulatory networks using bulk or single-cell accessible chromatin profiles; 2023. The Plant Journal. 117(1). 280–301.
Voichek Y., Hurieva B., Michaud C., Schmücker A., Vergara Z., Desvoyes B., Gutierrez C., Nizhynska V., Jaegle B., Borg M., Berger F., Nordborg M., Ingouff M. 2023. Cell cycle status of male and female gametes during Arabidopsis reproduction. Plant Physiology. 194(1). 412-421.
Zhang P., Mbodj A., Soundiramourtty A., Llauro C., Ghesquière A., Ingouff M., Slotkin K., Pontvianne F., Catoni M., Mirouze M. 2023. Extrachromosomal circular DNA and structural variants highlight genome instability in Arabidopsis epigenetic mutants. Nature Communications. 14. 5236.
Tovar-Aguilar A., Grimanelli D., Acosta-García G., Vielle-Calzada J.-P., Badillo-Corona J. A., Durán-Figueroa N. 2023. The miRNA822 loaded by ARGONAUTE9 modulates the monosporic female gametogenesis in Arabidopsis thaliana. Plant Reproduction. 37. 243-258.
Siena L., Michaud C., Selles B., Vega J. M., Pessino S., Ingouff M., Ortiz J. P. A., Leblanc O. 2023. TRIMETHYLGUANOSINE SYNTHASE1 mutations decanalize female germline development in Arabidopsis. New Phytologist. 240(2). 597-612.
