Happi Happi BG, Pelap GF, Symeonidou D, Larmande P.. 2025. GRU-SCANET: unleashing the power of GRU-based sinusoidal capture network for precision-driven named entity recognition. . Bioinform Adv.. 16:5(1) . vbaf096.

Shrestha A., Gonzales M., Ong P., Larmande P., Lee H. S., Jeung J. U., Kohli A., Chebotarov D., Mauleon R. P., Lee J. S., Mcnally K. L.. 2024. RicePilaf: a post-GWAS/QTL dashboard to integrate pangenomic, coexpression, regulatory, epigenomic, ontology, pathway, and text-mining information to provide functional insights into rice QTLs and GWAS loci. Gigascience. 13. giae013.

Ayadi N., Bernard S., Bossy R., Courtin M., Happi Happi B. G., Larmande P., Michel F., Nedellec C., Roussey C., Faron C.. 2024. A Unified approach to publish semantic annotations of agricultural documents as knowledge graphs. Smart Agricultural Technology. 8. 43.

Larmande P., Liu Y., Yao X., Xia J.. 2021. OryzaGP 2021 update: a rice gene and protein dataset for named-entity recognition. Genomics & Informatics. 19 (3). e27.

Do Q., Bich Hai H., Larmande P.. 2021. PyRice: a Python package for querying Oryza sativa databases. Bioinformatics. 37 (7). 1037-1038.

Larmande P., Jibril K. M.. 2020. Enabling a fast annotation process with the Table2Annotation tool. Genomics & Informatics. 18 (2). e19.

Gaubou B., Huynh N. Q., Philippon D., Brugiere A., Chapuis K., Taillandier P., Larmande P., Drogoul A.. 2020. COMOKIT: A Modeling Kit to Understand, Analyze, and Compare the Impacts of Mitigation Policies Against the COVID-19 Epidemic at the Scale of a City. Frontiers in Public Health. 8. 563247.

Nti-Addae Y., Matthews D., Ulat V. J., Syed R., Sempéré G., Pétel A., Renner J., Larmande P., Guignon V., Jones E., Robbins K.. 2019. Benchmarking database systems for Genomic Selection implementation. Database - The journal of Biological Databases and Curation. 2019. baz096.

Scheben A., Chan C.-K., Mansueto L., Mauleon R., Larmande P., Alexandrov N., Wing R., Mcnally K., Quesneville H., Edwards D.. 2019. Progress in single-access information systems for wheat and rice crop improvement. Briefings in Bioinformatics. 20(2). 565-571.

Abbeloos R., Backlund J. E., Basterrechea Salido M., Bauchet G., Benites-Alfaro O., Birkett C., Calaminos V. C., Carceller P., Cornut G., Vasques Costa B., Edwards J. D., Finkers R., Gao S. Y., Ghaffar M., Glaser P., Guignon V., Hok P., Kilian A., König P., Lagare J. E. B., Lange M., Laporte M.-A., Larmande P., LeBauer D. S., Lyon D. A., Marshall D. S., Matthews D., Milne I., Mistry N., Morales N., Mueller L. A., Neveu P., Papoutsoglou E., Pearce B., Perez-Masias I., Pommier C., Ramírez-González R. H., Rathore A., Raquel A. M., Raubach S., Rife T., Robbins K., Rouard M., Sarma C., Scholz U., Sempéré G., Shaw P. D., Simon R., Soldevilla N., Stephen G., Sun Q., Tovar C., Uszynski G., Verouden M., The BrAPI consortium.. 2019. BrAPI—an application programming interface for plant breeding applications. Bioinformatics. 35(20). 4147-4155.

Sempéré G., Petel A., Rouard M., Frouin J., Hueber Y., De Bellis F., Larmande P.. 2019. Gigwa v2—Extended and improved genotype investigator. GigaScience. 8(5). giz051.

Juanillas V., Dereeper A., Beaume N., Droc G., Dizon J., Mendoza J. R., Perdon J. P., Mansueto L., Triplett L., Lang J., Zhou G., Ratharanjan K., Plale B., Haga J., Leach J., Ruiz M., Thomson M., Alexandrov N., Larmande P., Kretzschlar T., Mauleon R.. 2019. Corrigedum to: Rice Galaxy: an open resource for plant science. GigaScience. 8 (12). giz156.

Larmande P., Do H., Wang Y.. 2019. OryzaGP: rice gene and protein dataset for named-entity recognition. Genomics & Informatics. 17 (2). e17.