Kaczmarek T., Cubry P., Champion L., Causse S., Couderc M., Orjuela J., Uyoh E. A., Oselebe H. O., Dachi S. N., Adje C. O. A., Sekloka E., Achigan-Dako E. G., Ibrahim Bio Yerima A. R., Idi Saidou S., Bakasso Y., Diop B. M., Gueye M. C., Agyare R. Y., Adjebeng-Danquah J., Gueye M., Wieringa J. J., Vigouroux Y., Billot C., Barnaud A., Lecler C.. 2025. Independent domestication and cultivation histories of two West African indigenous fonio millet crops. Nature Communications. 16. 4067.

Scarcelli N., Mariac C., Couderc M., Castro Ruiz D., Estivals G., Custodio Angulo Chavez C.A., Acho Vasquez H., Alvarado Reategui J. G., Vizcarra Bentos T., Garcia-Davila C.. 2025. The complete chloroplast genome of Tornillo (Cedrelinga cateniformis Ducke 1922, Fabaceae). Ecology and Evolution. 15(4). e71355.

Millet C. P., Allinne C., Vi T., Marraccini P., Verleysen L., Couderc M., Ruttink T., Zhang D., Sanchez W., Tranchant-Dubreuil C., Jeune W., Poncet V.. 2024. Haitian coffee agroforestry systems harbor complex arabica variety mixtures and under-recognized genetic diversity. PLOS ONE. 19(4). e0299493.

Scarcelli N., Garcia Davila C., Couderc M., Castro Ruiz D., Estivals G., Custodio Angulo Chavez C.A., Acho Vasquez H., Alvarado Reategui J.G., Vizcarra Bentos T., Mariac C.. 2024. The complete chloroplast genome of Marupa (Simarouba amara Aubl., Simaroubaceae). Ecology and Evolution. 14(7). e11688.

Adam H., Gutierrez A., Couderc M., Sabot F., Ntakirutimana F., Serret J., Orjuela J., Tregear J., Jouannic S., Lorieux M.. 2023. Genomic introgressions from African rice (Oryza glaberrima) in Asian rice (O. sativa) lead to the identification of key QTLs for panicle architecture. BMC Genomics. 24. 587.

Salson M., Orjuela J., Mariac C., Zekraoui L., Couderc M., Arribat S., Rodde N., Faye A., Kane N., Vigouroux Y., Tranchant-Dubreuil C., Berthouly-Salazar C.. 2023. An improved assembly of the pearl millet reference genome using Oxford Nanopore long reads and optical mapping. G3: Genes| Genomes| Genetics. 13(5). 1-7.

Kusuma J., Couderc M., Scarcelli N., Duminil J.. 2023. Complete chloroplast genome of two nutmeg species, Myristica argentea Warb. 1891 and Myristica fatua Houtt. 1774 (Myristicaceae). Mitochondrial DNA Part B: Resources. 8(7). 751-755.

Kaczmarek T., Causse S., Abdul S. D., Abraham S., Achigan‐dako E. G., Adje C., Adjebeng-Danquah J., Agyare R. Y., Akanvou L., Bakasso Y., Barry M. B., Bonsy S. K., Calatayyd C., Conde S., Couderc M., Dachi S. N., Diallo T., Diop B. M., Deu M., Gueye M. C., Ibrahim Bio Yerima A. R., Issah A. R., Kane N. A., Keita Y., James K., Ngom A., Noyer J.-L., Olodo K., Oselebe H. O., Pham J.-L., Piquet M., Puozaa D. K., Rivallan R., Saidou S., Sekloka E., Tengey T. K., Uyoh E. A., Vancoppenolle S., Vigouroux Y., Zekraoui L., Leclerc C., Barnaud A., Billot C.. 2023. Towards conservation and sustainable use of an indigenous crop: A large partnership network enabled the genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions. Plants, People, Planet. 7(3). 621-630.

Dagallier L.-P. M. J., Mbago F. M., Couderc M., Gaudeul M., Grall A., Loup C., Wieringa J. J., Sonké B., Couvreur T. L. P.. 2023. Phylogenomic inference of the African tribe Monodoreae (Annonaceae) and taxonomic revision of Dennettia, Uvariodendron and Uvariopsis. PhytoKeys. 233. 1-200.

Faye A., Barnaud A., Kane N. A., Cubry P., Mariac C., Burgarella C., Rhoné B., Faye A., Olodo K. F., Cissé A., Couderc M., Dequincey A., Zekraoui L., Moussa D., Tidjani M., Vigouroux Y., Berthouly-Salazar C.. 2022. Genomic footprints of selection in early-and late-flowering pearl millet landraces. Frontiers in Plant Science. 13. 880631.

De Aquino Oliveira S., Kiwuka C., Tournebize R., Gain C., Marraccini P., Mariac C., Bethune K., Couderc M., Cubry P., Andrade A., Lepelley M., Darracq O., Crouzillat D., Anten N., Musoli P., Vigouroux Y., De Kochko A., Manel S., François O., Poncet V.. 2022. Adaptive potential of Coffea canephora from Uganda in response to climate change. Molecular Ecology. 31(6). 1800-1819.

Rhoné B., Defrance D., Berthouly-Salazar C., Mariac C., Cubry P., Couderc M., Dequincey A., Assoumanne A., Kane N. A., Sultan B., Barnaud A., Vigouroux Y.. 2020. Pearl millet genomic vulnerability to climate change in West Africa highlights the need for regional collaboration. Nature Communications. 11. 5274.

Olodo K., Barnaud A., Kane N., Mariac C., Faye A., Couderc M., Zekraoui L., Dequincey A., Diouf D., Vigouroux Y., Berthouly-Salazar C.. 2020. Abandonment of pearl millet cropping and homogenization of its diversity over a 40 year period in Senegal. PLOS ONE. 15(9). e0239123.

Kusuma J., Scarcelli N., Couderc M., Mariac C., Zekraoui L., Duminil J.. 2020. Microsatellite markers development for Indonesian nutmeg (Myristica fragrans Houtt.) and transferability to other Myristicaceae spp. Molecular Biology Reports. 47. 4835-4840.

Abrouk M., Ahmed H. I., Cubry P., Imonikova D., Cauet S., Pailles Y., Bettgenhaeuser J., Gapa L., Scarcelli N., Couderc M., Zekraoui L., Kathiresan N., Čižkova J., Hřibova E., Doležel J., Arribat S., Berges H., Wieringa J., Gueye M., Kane N., Leclerc C., Causse S., Vancoppenolle S., Billot C., Wicker T., Vigouroux Y., Barnaud A., Krattinger S.. 2020. Fonio millet genome unlocks African orphan crop diversity for agriculture in a changing climate. Nature Communications. 11. 4488.

Scarcelli N., Cubry P., Akakpo R., Thuillet A.-C., Obidiegwu J., Baco M. N., Otoo E., Sonké B., Dansi A., Djedatin G., Mariac C., Couderc M., Causse S., Alix K., Chair H., François O., Vigouroux Y.. 2019. Yam genomics supports West Africa as a major cradle of crop domestication. Science Advances. 5(5). aaw1947.

Bethune K., Mariac C., Couderc M., Scarcelli N., Santoni S., Ardisson M., Martin J.-F., Montufar R., Klein V., Sabot F., Vigouroux Y., Couvreur T. L. P.. 2019. Long-fragment targeted capture for long-read sequencing of plastomes. Applications in Plant Sciences. 7(5). e1243.